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Title:
TSQ: Site A light availability
Access rights:
Free within projects
Usage rights:
Free within TreeDi project
Published:
No information available
Abstract:
Hemispherical photos were taken from above the shrubs found in the TSQS in the BEF-China experiment. These were used to calculated the amount of light that penetrates through the tree canopy, to the understory shrubs. This openness was calculated, using the WinSCANOPY software, which differentiates between sky and canopy (in the photos), and thereafter calculates the percentage of each; where the percentage of sky= openness.
Design:
Photographs were taken using a Nikon D100 camera with a fisheye lens (Nikon 10.5mm f/2.8 DX Fisheye, made in Japan). Camera setting was kept at S (automatic aperture), 250 shutter speed and lens set to manual. The camera was held horizontally with the top/flash showing North. All photos were taken at 1.5m and it was noted if this was above the shrub, or alternatively, when the shrub was too high, if it was taken on the north side.
Spatial extent:
BEF-China experiment, located near Xingangshang, Dexing City of Jianxi Province - Site A
Temporal extent:
No information available
Taxonomic extent:
Indirectly: Plants (shrubs); Camellia Chemikiangoleosa (CaCh) and Distylium myricoides (DiMy)
Measurement cirumstances:
No information available
Data analysis:
The hemispherical photos were grouped by the dates on which they were taken and then further divided into light and dark (subgroup). To analyse the Hemispherical photos, the WinSCANOPY 2009a (Regent Instruments Inc., Canada) software was used. The lens.cal was removed from the software folder (this is the software’s default camera and lens) as different models were used. In the WinSCANOPY program, new colour classes were created for each subgroup of each date folder. During this process, a diverse amount of colours from different photos in the folder were selected and defined as either ‘sky’ or ‘canopy’. The ‘Edit Classes’ tool was selected to ensure the colours were correctly defined and that the ‘Sky’ was selected for the openness calculation. For the first image, after the photo was uploaded, the analysis mode was selected and under ‘Hemisphere’ – ‘Camera and Lens’, the interactive mode was used to manually create a circular radius around the centre of the image, to ensure the top and bottom of the radius touch the top and bottom of the image respectively. For all the following images, the colour class created for the subgroup the image belongs to was loaded prior to analysis, the image was selected from the folder and finally ‘Hemisphere’ was set as ‘Duplicate Last’ to ensure the circular hemisphere for each image is identical (the same size, location and orientation). This was done individually for all images in order to ensure the openness value was realistic. If it was uncertain, the image was changed to black and white mode to better see what was classified as sky and canopy. Finally, the openness value of the output was noted with the corresponding image number (belonging to a particular shrub).

Filter:
Dataset column

Name:
plot
Definition:
plot
Unit:
No information available
Datagroup:
Plot name Main experiment (letter, number code)
Keywords:
No information available
Values:
D32
G21
F35
D33
C33
Contributors:
Christel, H., Pablo Casta Sánchez-Bermejo

Dataset column

Name:
shrub_id
Definition:
shrub_id
Unit:
No information available
Datagroup:
Shrub species identifier in the Main Experiment design
Keywords:
No information available
Values:
0010
0003
0005
0016
0004
Contributors:
No information available

Dataset column

Name:
shrub_sp
Definition:
Focal shrub above which the photos were taken: Camellia Chemikiangoleosa (CaCh) and Distylium myricoides (DiMy) are the two shrub species present in the TSQs in Site A
Unit:
No information available
Datagroup:
Plant trait
Keywords:
No information available
Values:
control
DiMy
CaCh
Contributors:
Christel, H., Pablo Casta Sánchez-Bermejo

Dataset column

Name:
direction
Definition:
Camera placement
Unit:
No information available
Datagroup:
Identifier
Keywords:
No information available
Values:
north
above
Contributors:
Christel, H., Pablo Casta Sánchez-Bermejo

Dataset column

Name:
photo_label
Definition:
The photo number/identification from the camera, in order to link the photo with the shrub_id, and later to link the openness result to a shrub_id
Unit:
No information available
Datagroup:
photo_label
Keywords:
No information available
Values:
DSC_0013.JPG
DSC_0007.JPG
DSC_0009.JPG
DSC_0006.JPG
DSC_0011.JPG
Contributors:
Christel, H., Pablo Casta Sánchez-Bermejo

Dataset column

Name:
Openness
Definition:
Light availability measurement
Unit:
Percentage
Datagroup:
Environmental trait
Keywords:
No information available
Values:
100
10.71
10.83
10.97
10.47
Contributors:
No information available

Dataset column

Name:
date
Definition:
The date when the photo was taken in the field
Unit:
No information available
Datagroup:
Date
Keywords:
No information available
Values:
2023-09-16
2023-09-17
Contributors:
Christel, H., Pablo Casta Sánchez-Bermejo

Dataset column

Name:
time
Definition:
Time of day when the photo was taken in the field
Unit:
No information available
Datagroup:
time point
Keywords:
No information available
Values:
1899-12-30 01:13:00
1899-12-30 01:26:00
1899-12-30 01:21:00
1899-12-30 01:18:00
1899-12-30 01:23:00
Contributors:
Christel, H., Pablo Casta Sánchez-Bermejo

Dataset column

Name:
comment
Definition:
Any additional notes
Unit:
No information available
Datagroup:
Comments
Keywords:
No information available
Values:
0716; 0717; 0817; 0816
0306; 0307; 0407; 0406
0004; 0005; 0104; 0105
0614; 0615; 0715; 0714
1510; 1511; 1611; 1610
Contributors:
Christel, H., Pablo Casta Sánchez-Bermejo

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